Metagenomic Assembly WorkshopΒΆ
In this metagenomics workshop we will learn how to:
- Quality trim reads with sickle
- Perform assemblies with velvet
- Map back reads to assemblies with bowtie2
The workshop has the following exercises:
At least a basic knowledge of how to work with the command line is required otherwise it will be very difficult to follow some of the examples. Have fun!